STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B2577Putative FAD dependent oxidoreductase. (390 aa)    
Predicted Functional Partners:
Bxe_B1598
Sarcosine oxidase, alpha subunit, heterotetrameric; Belongs to the GcvT family.
 
 0.981
Bxe_B1599
Putative sarcosine oxidase delta subunit; SoxD.
 
 0.819
Bxe_A0365
Glutamate synthase (NADH) large subunit.
    
 0.785
Bxe_B1666
Dehydrogenase; Belongs to the GcvT family.
 
0.779
Bxe_B1597
Sarcosine oxidase, gamma subunit.
 
 0.773
Bxe_B0747
Pyridine nucleotide- disulfide oxidoreductase family protein.
 
 0.753
Bxe_B1500
Pyridine nucleotide-disulfide oxidoreductase.
 
 0.746
Bxe_C0780
Putative FAD dependent oxidoreductase.
 
 0.745
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
 
 0.720
Bxe_C1159
Putative FAD dependent oxidoreductase.
  
     0.692
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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