STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B2961Putative hydrolase. (111 aa)    
Predicted Functional Partners:
Bxe_B2960
Altronate dehydratase.
 
  
  0.994
Bxe_A4448
Altronate dehydratase.
 
  
  0.952
Bxe_B1801
Galactarate dehydratase.
 
  
  0.951
Bxe_B2210
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.912
Bxe_A2336
Sugar kinase, ribokinase family.
    
 0.887
Bxe_A1980
Putative sugar (2-ketogluconate) kinase, PfkB family.
    
 0.839
Bxe_B2958
Conserved hypothetical protein.
 
   
 0.738
Bxe_B2957
Putative short-chain dehydrogenase/reductase.
 
  
  0.731
Bxe_A0730
Putative D-arabinitol 4-dehydrogenase.
 
  
 0.719
Bxe_B2962
Monosaccharide ABC transporter membrane protein, CUT2 family; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
       0.710
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.