STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maiAPutative cis-trans isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. (251 aa)    
Predicted Functional Partners:
Bxe_C0217
Isochorismatase hydrolase family protein.
 
  
 0.962
Bxe_C0215
Putative hydrolase, alpha/beta fold family.
 
   
 0.939
Bxe_C0216
Conserved hypothetical protein.
 
  
 0.935
Bxe_B2893
Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
  0.911
Bxe_A1530
Aspartate racemase.
     
 0.904
Bxe_A3003
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
     
 0.886
Bxe_B0364
Putative isochorismate hydrolase.
 
  
 0.797
Bxe_C0213
Salicylate 1-monooxygenase (NahW).
 
  
 0.790
Bxe_C0259
Isochorismatase hydrolase family protein.
 
  
 0.723
Bxe_C0068
Putative isomerase.
 
  
 
0.630
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.