STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_C0438Outer membrane porin, OmpC family. (344 aa)    
Predicted Functional Partners:
Bxe_A4418
Putative thioredoxin protein.
  
 
   0.748
Bxe_C0008
Outer membrane porin, OmpC family.
  
  
 
0.675
Bxe_C0350
Outer membrane porin, OmpC family.
  
  
 
0.675
Bxe_C0910
Outer membrane porin, OmpC family.
  
  
 
0.675
Bxe_C1313
Outer membrane porin, OmpC family.
  
  
 
0.675
Bxe_A3528
Outer membrane porin, OmpC family.
  
  
 
0.674
Bxe_B0061
Outer membrane porin, OmpC family.
  
  
 
0.674
Bxe_B1114
Outer membrane porin, OmpC family.
  
  
 
0.674
Bxe_B2803
Outer membrane porin, OmpC family.
  
  
 
0.674
Bxe_C0730
Outer membrane porin, OmpC family.
  
  
 
0.674
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.