STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_C0483Na+/divalent cation symporter, DASS family. (486 aa)    
Predicted Functional Partners:
Bxe_C0482
Transcriptional regulator, AraC family.
 
     0.625
Bxe_B0241
Putative malonate transporter, AEC family.
 
   0.600
Bxe_A0283
Malate dehydrogenase (oxaloacetatedecarboxylating) (NADP+)., Phosphate acetyltransferase; Belongs to the malic enzymes family.
  
  
 0.588
Bxe_A0557
Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+)., Phosphate acetyltransferase.
  
  
 0.588
Bxe_A3355
Malate dehydrogenase (oxaloacetatedecarboxylating) (NADP+), Phosphate acetyltransferase.
  
  
 0.588
Bxe_A4152
TC 4.A.1.1.2; TC 4.A.1.1.2.
  
  
 0.515
Bxe_C0481
Conserved hypothetical protein.
 
     0.495
Bxe_C0484
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.486
Bxe_A3468
Putative iron-sulphur rieske protein.
  
     0.463
Bxe_A3136
Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.431
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.