Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bxe_A2212 | Bxe_A4220 | Bxe_A2212 | Bxe_A4220 | Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Putative ferredoxin. | 0.989 |
Bxe_A2212 | Bxe_C0528 | Bxe_A2212 | Bxe_C0528 | Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit. | 0.999 |
Bxe_A2212 | Bxe_C0529 | Bxe_A2212 | Bxe_C0529 | Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Putative NADH dehydrogenase subunit. | 0.656 |
Bxe_A2212 | Bxe_C0530 | Bxe_A2212 | Bxe_C0530 | Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Hydrogen dehydrogenase. | 0.987 |
Bxe_A2212 | Bxe_C0531 | Bxe_A2212 | Bxe_C0531 | Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | NAD(P)-dependent nickel-iron dehydrogenase catalytic subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | 0.988 |
Bxe_A2212 | boxA-2 | Bxe_A2212 | Bxe_C0890 | Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | benzoyl-CoA oxygenase, component A; Citation: J. Bacteriol. 2002 Nov;184(22):6301- 15.Mol. Microbiol. 2004 Oct;54(1):223-38. Appl EnvironMicrobiol. 2004 Aug;70(8):4961-70. | 0.993 |
Bxe_A2212 | fdhA | Bxe_A2212 | Bxe_A0964 | Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Formate dehydrogenase alpha subunit. | 0.959 |
Bxe_A4220 | Bxe_A2212 | Bxe_A4220 | Bxe_A2212 | Putative ferredoxin. | Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.989 |
Bxe_A4220 | Bxe_C0528 | Bxe_A4220 | Bxe_C0528 | Putative ferredoxin. | NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit. | 0.995 |
Bxe_A4220 | Bxe_C0529 | Bxe_A4220 | Bxe_C0529 | Putative ferredoxin. | Putative NADH dehydrogenase subunit. | 0.620 |
Bxe_A4220 | Bxe_C0530 | Bxe_A4220 | Bxe_C0530 | Putative ferredoxin. | Hydrogen dehydrogenase. | 0.939 |
Bxe_A4220 | Bxe_C0531 | Bxe_A4220 | Bxe_C0531 | Putative ferredoxin. | NAD(P)-dependent nickel-iron dehydrogenase catalytic subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | 0.938 |
Bxe_A4220 | boxA-2 | Bxe_A4220 | Bxe_C0890 | Putative ferredoxin. | benzoyl-CoA oxygenase, component A; Citation: J. Bacteriol. 2002 Nov;184(22):6301- 15.Mol. Microbiol. 2004 Oct;54(1):223-38. Appl EnvironMicrobiol. 2004 Aug;70(8):4961-70. | 0.605 |
Bxe_A4220 | fdhA | Bxe_A4220 | Bxe_A0964 | Putative ferredoxin. | Formate dehydrogenase alpha subunit. | 0.986 |
Bxe_C0528 | Bxe_A2212 | Bxe_C0528 | Bxe_A2212 | NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit. | Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.999 |
Bxe_C0528 | Bxe_A4220 | Bxe_C0528 | Bxe_A4220 | NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit. | Putative ferredoxin. | 0.995 |
Bxe_C0528 | Bxe_C0529 | Bxe_C0528 | Bxe_C0529 | NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit. | Putative NADH dehydrogenase subunit. | 0.999 |
Bxe_C0528 | Bxe_C0530 | Bxe_C0528 | Bxe_C0530 | NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit. | Hydrogen dehydrogenase. | 0.999 |
Bxe_C0528 | Bxe_C0531 | Bxe_C0528 | Bxe_C0531 | NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit. | NAD(P)-dependent nickel-iron dehydrogenase catalytic subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | 0.999 |
Bxe_C0528 | Bxe_C0532 | Bxe_C0528 | Bxe_C0532 | NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit. | Hypothetical protein. | 0.923 |
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