STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_C0597Thiolase; Citation: J. Bacteriol. 186:3631-3639(2004); Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)    
Predicted Functional Partners:
Bxe_A4037
3-hydroxyacyl-CoA dehydrogenase.
 
 0.993
Bxe_A1391
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.992
Bxe_A2274
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase.
 
 0.992
Bxe_C0280
3-hydroxyacyl-CoA dehydrogenase.
 
 0.991
Bxe_C0596
3-hydroxyacyl-CoA dehydrogenase; Citation: J. Bacteriol. 186:3631-3639(2004).
 0.951
Bxe_B2944
3-hydroxyacyl-CoA dehydrogenase.
 0.839
Bxe_B0376
3-hydroxyacyl-CoA dehydrogenase.
 0.803
Bxe_C0277
3-hydroxyacyl-CoA dehydrogenase.
 0.792
Bxe_A2745
Predicted nucleic-acid-binding protein containing a Zn-ribbon.
  
 0.789
Bxe_A3541
Hypothetical protein.
  
 0.789
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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