STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_C0656Conserved hypothetical protein. (278 aa)    
Predicted Functional Partners:
Bxe_C0655
Putative acyl-CoA dehydrogenase.
 
     0.925
Bxe_C0657
Putative acyl-CoA transferase; Belongs to the CoA-transferase III family.
 
 
 0.911
Bxe_B0866
Putative glyoxalase/bleomycin resistance protein/dioxygenase.
 
    0.802
Bxe_B2584
Putative acyl-CoA dehydrogenase.
 
     0.750
Bxe_B2582
Putative MmgE/Prp family protein.
 
    0.664
Bxe_B2583
Putative CAIB/BAIF family protein; Belongs to the CoA-transferase III family.
 
 
 0.628
Bxe_B1004
Putative MmgE/Prp family protein.
 
    0.587
Bxe_A2758
Putative citrate lyase beta chain (acyl lyase subunit); Belongs to the HpcH/HpaI aldolase family.
  
 
 0.585
Bxe_A4082
Citrate lyase; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.585
Bxe_B0989
Putative citrate lyase, beta subunit; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.585
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.