STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_C0683Putative hydrolase. (271 aa)    
Predicted Functional Partners:
Bxe_A4238
3-oxoadipate enol-lactonase.
  
  
 0.798
pcaD
3-oxoadipate enol-lactonase.
  
  
 0.795
Bxe_C1391
Putative hydrolase.
  
  
  0.785
Bxe_B2696
Putative hydrolase.
  
  
  0.784
apaH
Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.772
Bxe_B1132
Putative hydrolase.
  
     0.741
Bxe_C0684
Amino acid ABC transporter membrane protein, PAAT family; TC 3.A.1.3.-.
       0.718
Bxe_C0685
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
       0.718
Bxe_C0682
Hypothetical protein.
    
 0.714
Bxe_B0682
Putative hydrolase, alpha/beta fold family.
  
     0.709
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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