STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_C0717Conserved hypothetical protein; Belongs to the 4-oxalocrotonate tautomerase family. (131 aa)    
Predicted Functional Partners:
Bxe_C0716
Hypothetical protein.
       0.768
amnE
4-oxalocrotonate decarboxylase; Citation: Arch Microbiol. 2000 Oct;174(4):265-72.
    
 0.762
Bxe_C0718
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.659
amnC
2-hydroxymuconate semialdehyde dehydrogenase; Citation: Arch Microbiol. 2000 Oct;174(4):265-72; Belongs to the aldehyde dehydrogenase family.
    
 0.641
Bxe_C1001
Putative ring-cleavage dioxygenase.
    
 0.555
Bxe_B0184
Glyoxalase family protein.
    
 0.552
Bxe_A3959
Para-aminobenzoate synthase, component I.
    
 0.524
Bxe_B1751
Conserved hypothetical protein.
  
     0.502
Bxe_B2853
Conserved hypothetical protein.
    
  0.482
Bxe_A0632
Conserved hypothetical protein.
    
 0.479
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.