Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bxe_A0784 | Bxe_A2048 | Putative aldo/keto reductase family oxidoreductase. | methylmalonyl-CoA epimerase. | 0.432 |
Bxe_A0784 | Bxe_A4004 | Putative aldo/keto reductase family oxidoreductase. | Hypothetical protein. | 0.432 |
Bxe_A0784 | Bxe_A4104 | Putative aldo/keto reductase family oxidoreductase. | Conserved hypothetical protein. | 0.432 |
Bxe_A0784 | Bxe_C0820 | Putative aldo/keto reductase family oxidoreductase. | Conserved hypothetical protein. | 0.503 |
Bxe_A0784 | Bxe_C1205 | Putative aldo/keto reductase family oxidoreductase. | Putative superoxide dismutase. | 0.415 |
Bxe_A2048 | Bxe_A0784 | methylmalonyl-CoA epimerase. | Putative aldo/keto reductase family oxidoreductase. | 0.432 |
Bxe_A2048 | Bxe_A2930 | methylmalonyl-CoA epimerase. | Putative thiosulfate sulfurtransferase, Rhodanese domain-containing. | 0.483 |
Bxe_A2048 | Bxe_B1266 | methylmalonyl-CoA epimerase. | Aldo/keto reductase. | 0.432 |
Bxe_A2048 | Bxe_B2405 | methylmalonyl-CoA epimerase. | Putative rhodanese-like domain protein. | 0.483 |
Bxe_A2048 | Bxe_C0820 | methylmalonyl-CoA epimerase. | Conserved hypothetical protein. | 0.508 |
Bxe_A2048 | Bxe_C1205 | methylmalonyl-CoA epimerase. | Putative superoxide dismutase. | 0.469 |
Bxe_A2930 | Bxe_A2048 | Putative thiosulfate sulfurtransferase, Rhodanese domain-containing. | methylmalonyl-CoA epimerase. | 0.483 |
Bxe_A2930 | Bxe_A4004 | Putative thiosulfate sulfurtransferase, Rhodanese domain-containing. | Hypothetical protein. | 0.483 |
Bxe_A2930 | Bxe_A4104 | Putative thiosulfate sulfurtransferase, Rhodanese domain-containing. | Conserved hypothetical protein. | 0.483 |
Bxe_A2930 | Bxe_B2405 | Putative thiosulfate sulfurtransferase, Rhodanese domain-containing. | Putative rhodanese-like domain protein. | 0.683 |
Bxe_A2930 | Bxe_C0820 | Putative thiosulfate sulfurtransferase, Rhodanese domain-containing. | Conserved hypothetical protein. | 0.512 |
Bxe_A2930 | Bxe_C1205 | Putative thiosulfate sulfurtransferase, Rhodanese domain-containing. | Putative superoxide dismutase. | 0.928 |
Bxe_A4004 | Bxe_A0784 | Hypothetical protein. | Putative aldo/keto reductase family oxidoreductase. | 0.432 |
Bxe_A4004 | Bxe_A2930 | Hypothetical protein. | Putative thiosulfate sulfurtransferase, Rhodanese domain-containing. | 0.483 |
Bxe_A4004 | Bxe_B1266 | Hypothetical protein. | Aldo/keto reductase. | 0.432 |
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