STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_C0919Putative coenzyme F390 synthetase II. (470 aa)    
Predicted Functional Partners:
Bxe_A0467
Phenylacetic acid degradation- related thioesterase (PaaI); Phenylacetyl-CoA pathway; Citation: Gene 341, 167-179 (2004). EnvironMicrobiol. 2002 Dec;4(12):824-41.
 
 
 0.886
Bxe_A0295
Phenylacetic acid degradation protein PaaA; Phenylacetyl-CoA pathway; Citation: J. Bacteriol. 182 (2), 286-294 (2000).Proc. Natl. Acad. Sci. U.S.A. 95 (11), 6419-6424 (1998).J. Bacteriol. 180 (5), 1063-1071 (1998). EnvironMicrobiol. 2002 Dec;4(12):824-41.
 
 
 0.823
Bxe_A0292
Phenylacetic acid degradation protein PaaD; Phenylacetyl-CoA pathway; Citation: J. Bacteriol. 182 (2), 286-294 (2000). J.Bacteriol. 180 (5), 1063-1071 (1998). FEBS Lett. 406(1- 2), 23-27 (1997). Environ Microbiol. 2002Dec;4(12):824-41.
 
  
 0.820
Bxe_A0293
Phenylacetic acid degradation protein PaaC; Phenylacetyl-CoA pathway; Citation: J. Bacteriol. 182 (2), 286-294 (2000).Mol. Genet. Genomics 267 (5), 656-663 (2002). J.Bacteriol. 180 (5), 1063-1071 (1998). Environ Microbiol.2002 Dec;4(12):824-41.
 
 
 0.806
Bxe_A0294
Phenylacetic acid degradation protein PaaB; Phenylacetyl-CoA pathway; Citation: Mol. Genet. Genomics 267 (5), 656- 663(2002). J. Bacteriol. 187 (4), 1493-1503 (2005). FEBSLett. 406 (1-2), 23-27 (1997). Environ Microbiol. 2002Dec;4(12):824-41.
 
 
 0.800
Bxe_A1420
3,4-dehydroadipyl-CoA semialdehyde dehydrogenase; Citation: J. Bacteriol. 2002 Nov;184(22):6301- 15.Appl Environ Microbiol. 2004 Aug;70(8):4961-70.
 
 
 0.703
Bxe_C0895
3,4-dehydroadipyl-CoA semialdehyde dehydrogenase; Citation: J. Bacteriol. 2002 Nov;184(22):6301- 15.Appl Environ Microbiol. 2004 Aug;70(8):4961-70.
 
 
 0.700
Bxe_A0291
Phenylacetic acid degradation NADH oxidoreductase PaaE; Phenylacetyl-CoA pathway; Citation: J. Bacteriol. 182 (2), 286-294 (2000). J.Bacteriol. 180 (5), 1063-1071 (1998). Proc. Natl. Acad.Sci. U.S.A. 95 (11), 6419-6424 (1998). Environ Microbiol.2002 Dec;4(12):824-41.
 
 
 0.680
Bxe_A0015
Methylmalonate-semialdehyde dehydrogenase (acylating).
   
 0.632
Bxe_A0172
Coniferyl aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.632
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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