STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_C1052Biopolymer transport protein ExbD/TolR. (156 aa)    
Predicted Functional Partners:
Bxe_C1053
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
 
 
 0.985
Bxe_A0574
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.955
Bxe_A3141
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
 
 
 0.955
Bxe_C0226
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
 
 
 0.955
Bxe_B2476
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
 
 
 0.952
tolQ
Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.951
Bxe_C0382
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
 
 
 0.951
Bxe_A2999
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
 
 
 0.949
Bxe_C1054
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.931
Bxe_B0899
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
 
 
 0.916
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.