STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_C1117Conserved hypothetical protein. (262 aa)    
Predicted Functional Partners:
Bxe_C1116
ABC transporter, periplasmic ligand binding protein.
       0.773
Bxe_C0780
Putative FAD dependent oxidoreductase.
 
     0.532
Bxe_B1500
Pyridine nucleotide-disulfide oxidoreductase.
 
     0.489
Bxe_C0779
Conserved hypothetical protein.
 
     0.467
Bxe_A1927
Uncharacterized conserved protein.
    
  0.432
Bxe_A1934
Putative transthyretin-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
    
  0.430
Bxe_B0747
Pyridine nucleotide- disulfide oxidoreductase family protein.
 
     0.427
Bxe_B2708
Putative opine oxidase subunit a.
 
     0.408
Bxe_A2390
Putative polysaccharide deacetylase.
 
  
  0.407
Bxe_B1499
Putative NAD(FAD)-dependent dehydrogenase.
 
     0.406
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.