Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Bxe_A0849 | Bxe_A0992 | Conserved hypothetical protein; Weak similarity to helicase domain proteins. | Putative histone deacetylase-family protein. | 0.954 |
| Bxe_A0849 | Bxe_A4461 | Conserved hypothetical protein; Weak similarity to helicase domain proteins. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.989 |
| Bxe_A0849 | Bxe_B1514 | Conserved hypothetical protein; Weak similarity to helicase domain proteins. | Putative histone deacetylase-family protein. | 0.954 |
| Bxe_A0849 | Bxe_C1245 | Conserved hypothetical protein; Weak similarity to helicase domain proteins. | Tryptophan 2-monooxygenase. | 0.925 |
| Bxe_A0992 | Bxe_A0849 | Putative histone deacetylase-family protein. | Conserved hypothetical protein; Weak similarity to helicase domain proteins. | 0.954 |
| Bxe_A0992 | Bxe_A1202 | Putative histone deacetylase-family protein. | Putative, plasmid-related, DNA/RNA helicase. | 0.954 |
| Bxe_A0992 | Bxe_B1664 | Putative histone deacetylase-family protein. | Putative helicase. | 0.954 |
| Bxe_A0992 | Bxe_C1245 | Putative histone deacetylase-family protein. | Tryptophan 2-monooxygenase. | 0.981 |
| Bxe_A1202 | Bxe_A0992 | Putative, plasmid-related, DNA/RNA helicase. | Putative histone deacetylase-family protein. | 0.954 |
| Bxe_A1202 | Bxe_A4461 | Putative, plasmid-related, DNA/RNA helicase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.989 |
| Bxe_A1202 | Bxe_B1514 | Putative, plasmid-related, DNA/RNA helicase. | Putative histone deacetylase-family protein. | 0.954 |
| Bxe_A1202 | Bxe_C1245 | Putative, plasmid-related, DNA/RNA helicase. | Tryptophan 2-monooxygenase. | 0.925 |
| Bxe_A2303 | Bxe_B0010 | Putative phytoene synthase. | Putative squalene/phytoene synthase. | 0.769 |
| Bxe_A2303 | Bxe_B0019 | Putative phytoene synthase. | Putative squalene/phytoene synthase. | 0.827 |
| Bxe_A2303 | Bxe_B0485 | Putative phytoene synthase. | Farnesyl-diphosphate farnesyltransferase. | 0.599 |
| Bxe_A2303 | Bxe_C1245 | Putative phytoene synthase. | Tryptophan 2-monooxygenase. | 0.727 |
| Bxe_A4461 | Bxe_A0849 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Conserved hypothetical protein; Weak similarity to helicase domain proteins. | 0.989 |
| Bxe_A4461 | Bxe_A1202 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Putative, plasmid-related, DNA/RNA helicase. | 0.989 |
| Bxe_A4461 | Bxe_B1664 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Putative helicase. | 0.989 |
| Bxe_A4461 | Bxe_C1245 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Tryptophan 2-monooxygenase. | 0.784 |
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