Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bxe_A0834 | Bxe_C1331 | Peptidase T2, asparaginase 2. | Transcriptional regulator, RpiR family. | 0.553 |
Bxe_A1326 | Bxe_A4152 | 5-dehydro-2-deoxygluconokinase. | TC 4.A.1.1.2; TC 4.A.1.1.2. | 0.503 |
Bxe_A1326 | Bxe_A4153 | 5-dehydro-2-deoxygluconokinase. | PTS system IIA component, Glc family / Phosphocarrier protein HPr; TC 4.A.1; Belongs to the PEP-utilizing enzyme family. | 0.517 |
Bxe_A1326 | Bxe_B2699 | 5-dehydro-2-deoxygluconokinase. | Transketolase subunit B. | 0.426 |
Bxe_A1326 | Bxe_C1331 | 5-dehydro-2-deoxygluconokinase. | Transcriptional regulator, RpiR family. | 0.507 |
Bxe_A4152 | Bxe_A1326 | TC 4.A.1.1.2; TC 4.A.1.1.2. | 5-dehydro-2-deoxygluconokinase. | 0.503 |
Bxe_A4152 | Bxe_A4153 | TC 4.A.1.1.2; TC 4.A.1.1.2. | PTS system IIA component, Glc family / Phosphocarrier protein HPr; TC 4.A.1; Belongs to the PEP-utilizing enzyme family. | 0.999 |
Bxe_A4152 | Bxe_B2699 | TC 4.A.1.1.2; TC 4.A.1.1.2. | Transketolase subunit B. | 0.813 |
Bxe_A4152 | Bxe_C1331 | TC 4.A.1.1.2; TC 4.A.1.1.2. | Transcriptional regulator, RpiR family. | 0.750 |
Bxe_A4153 | Bxe_A1326 | PTS system IIA component, Glc family / Phosphocarrier protein HPr; TC 4.A.1; Belongs to the PEP-utilizing enzyme family. | 5-dehydro-2-deoxygluconokinase. | 0.517 |
Bxe_A4153 | Bxe_A4152 | PTS system IIA component, Glc family / Phosphocarrier protein HPr; TC 4.A.1; Belongs to the PEP-utilizing enzyme family. | TC 4.A.1.1.2; TC 4.A.1.1.2. | 0.999 |
Bxe_A4153 | Bxe_B2699 | PTS system IIA component, Glc family / Phosphocarrier protein HPr; TC 4.A.1; Belongs to the PEP-utilizing enzyme family. | Transketolase subunit B. | 0.897 |
Bxe_A4153 | Bxe_C1331 | PTS system IIA component, Glc family / Phosphocarrier protein HPr; TC 4.A.1; Belongs to the PEP-utilizing enzyme family. | Transcriptional regulator, RpiR family. | 0.514 |
Bxe_B2352 | Bxe_C1330 | ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein. | Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. | 0.652 |
Bxe_B2352 | Bxe_C1331 | ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein. | Transcriptional regulator, RpiR family. | 0.610 |
Bxe_B2699 | Bxe_A1326 | Transketolase subunit B. | 5-dehydro-2-deoxygluconokinase. | 0.426 |
Bxe_B2699 | Bxe_A4152 | Transketolase subunit B. | TC 4.A.1.1.2; TC 4.A.1.1.2. | 0.813 |
Bxe_B2699 | Bxe_A4153 | Transketolase subunit B. | PTS system IIA component, Glc family / Phosphocarrier protein HPr; TC 4.A.1; Belongs to the PEP-utilizing enzyme family. | 0.897 |
Bxe_B2699 | Bxe_C1331 | Transketolase subunit B. | Transcriptional regulator, RpiR family. | 0.515 |
Bxe_C1324 | Bxe_C1328 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.799 |
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