STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY04_00110Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)    
Predicted Functional Partners:
HY04_00105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
HY04_00115
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.663
HY04_02335
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
HY04_10925
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
HY04_05975
Transcription elongation protein SprT; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
HY04_05680
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.407
HY04_09935
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.400
Your Current Organism:
Chryseobacterium antarcticum
NCBI taxonomy Id: 266748
Other names: C. antarcticum, Chryseobacterium antarcticum (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1013, DSM 17047, IMSNU 14040, JCM 12381, KCTC 12225, NCTC 13489, Sejongia antarctica, Sejongia antarctica Yi et al. 2005, strain AT1013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.