STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY04_00220Zinc permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)    
Predicted Functional Partners:
HY04_00215
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.783
HY04_10815
6-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
HY04_07015
Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
rlmL
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.
 
     0.671
HY04_08180
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
HY04_04920
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.643
HY04_00835
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
HY04_02645
Orotate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
HY04_12740
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.571
HY04_14245
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
Your Current Organism:
Chryseobacterium antarcticum
NCBI taxonomy Id: 266748
Other names: C. antarcticum, Chryseobacterium antarcticum (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1013, DSM 17047, IMSNU 14040, JCM 12381, KCTC 12225, NCTC 13489, Sejongia antarctica, Sejongia antarctica Yi et al. 2005, strain AT1013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.