STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dltBHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane-bound acyltransferase family. (477 aa)    
Predicted Functional Partners:
HY04_04415
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.966
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.854
HY04_12750
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.854
HY04_04395
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.802
HY04_04420
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.802
phaJ
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.761
fabG_2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
HY04_04425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.638
HY04_04430
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.577
kfoC_5
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.453
Your Current Organism:
Chryseobacterium antarcticum
NCBI taxonomy Id: 266748
Other names: C. antarcticum, Chryseobacterium antarcticum (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1013, DSM 17047, IMSNU 14040, JCM 12381, KCTC 12225, NCTC 13489, Sejongia antarctica, Sejongia antarctica Yi et al. 2005, strain AT1013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.