STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY04_04600Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)    
Predicted Functional Partners:
rfbF_2
Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.982
yhbJ
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.971
ybbD
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.898
bglX
beta-D-glucoside glucohydrolase; Catalyzes the hydrolysis of terminal beta-D-glucosyl residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.579
HY04_04590
Exosortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
HY04_04595
Exosortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
dacC
Peptidase S13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.527
glcK
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.523
HY04_09280
Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.480
HY04_05530
Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.441
Your Current Organism:
Chryseobacterium antarcticum
NCBI taxonomy Id: 266748
Other names: C. antarcticum, Chryseobacterium antarcticum (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1013, DSM 17047, IMSNU 14040, JCM 12381, KCTC 12225, NCTC 13489, Sejongia antarctica, Sejongia antarctica Yi et al. 2005, strain AT1013
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