STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY04_05875Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)    
Predicted Functional Partners:
ypdA
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.796
yehT_2
LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.794
HY04_05880
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.790
HY04_05870
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.782
HY04_00695
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
HY04_10385
Beta-carotene 15,15'-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.607
HY04_06390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.599
HY04_05885
protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.576
HY04_02645
Orotate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
HY04_02405
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
Your Current Organism:
Chryseobacterium antarcticum
NCBI taxonomy Id: 266748
Other names: C. antarcticum, Chryseobacterium antarcticum (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1013, DSM 17047, IMSNU 14040, JCM 12381, KCTC 12225, NCTC 13489, Sejongia antarctica, Sejongia antarctica Yi et al. 2005, strain AT1013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.