STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY04_06015TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (739 aa)    
Predicted Functional Partners:
HY04_06020
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.909
HY04_14780
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.698
HY04_03920
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.635
HY04_04285
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.536
HY04_14810
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.536
HY04_13160
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.535
sodC
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.523
HY04_14705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.516
HY04_10040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.510
HY04_02030
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.492
Your Current Organism:
Chryseobacterium antarcticum
NCBI taxonomy Id: 266748
Other names: C. antarcticum, Chryseobacterium antarcticum (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1013, DSM 17047, IMSNU 14040, JCM 12381, KCTC 12225, NCTC 13489, Sejongia antarctica, Sejongia antarctica Yi et al. 2005, strain AT1013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.