STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY04_09075Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)    
Predicted Functional Partners:
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.641
HY04_11995
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
HY04_09495
Transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
HY04_09070
Polyphosphate:nucleotide phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.543
HY04_09085
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.534
HY04_12280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
HY04_04875
uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
HY04_02015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.458
HY04_13990
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.429
HY04_04800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.428
Your Current Organism:
Chryseobacterium antarcticum
NCBI taxonomy Id: 266748
Other names: C. antarcticum, Chryseobacterium antarcticum (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1013, DSM 17047, IMSNU 14040, JCM 12381, KCTC 12225, NCTC 13489, Sejongia antarctica, Sejongia antarctica Yi et al. 2005, strain AT1013
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