STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB88519.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
SFC13142.1
Hypothetical protein.
  
     0.772
SFC26317.1
pRiA4b ORF-3-like protein.
  
     0.768
SFB69330.1
Hypothetical protein.
  
     0.755
SFC33194.1
Branched-chain amino acid aminotransferase.
  
     0.747
SFC01981.1
Hypothetical protein.
  
     0.735
SFC05483.1
Protein of unknown function.
 
     0.718
SFC20360.1
Smr domain-containing protein.
  
     0.714
SFB70182.1
Mevalonate kinase.
  
     0.713
ruvB
Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
  
    0.705
SFC14455.1
Cell division protein ZapA.
  
     0.704
Your Current Organism:
Chryseobacterium jeonii
NCBI taxonomy Id: 266749
Other names: C. jeonii, Chryseobacterium jeonii (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1047, DSM 17048, IMSNU 14049, JCM 12382, KCTC 12226, NCTC 13459, Sejongia jeonii, Sejongia jeonii Yi et al. 2005, strain AT1047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.