STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC00814.1Magnesium chelatase family protein. (511 aa)    
Predicted Functional Partners:
SFC00732.1
DNA processing protein.
 
 0.845
SFC30937.1
comF family protein.
 
  
 0.822
SFB87407.1
Competence protein ComEC.
 
  
 0.745
SFB77279.1
Putative endonuclease; Belongs to the UPF0102 family.
 
  
 0.632
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.614
SFC00840.1
L,D-transpeptidase catalytic domain.
  
    0.613
Your Current Organism:
Chryseobacterium jeonii
NCBI taxonomy Id: 266749
Other names: C. jeonii, Chryseobacterium jeonii (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1047, DSM 17048, IMSNU 14049, JCM 12382, KCTC 12226, NCTC 13459, Sejongia jeonii, Sejongia jeonii Yi et al. 2005, strain AT1047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.