STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC10535.1Hypothetical protein. (223 aa)    
Predicted Functional Partners:
SFC10515.1
ABC1 family protein.
 
     0.953
SFC10478.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.702
SFC10572.1
Phytoene/squalene synthetase.
 
     0.623
SFC10498.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
     0.580
SFC10552.1
Phytoene desaturase.
       0.574
SFC10602.1
Beta-carotene 3-hydroxylase.
 
     0.549
SFC10640.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
 
     0.527
SFB71870.1
Hypothetical protein.
  
     0.513
SFC10587.1
Hypothetical protein.
       0.461
SFB70900.1
Anti-sigma-K factor RskA.
  
     0.432
Your Current Organism:
Chryseobacterium jeonii
NCBI taxonomy Id: 266749
Other names: C. jeonii, Chryseobacterium jeonii (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1047, DSM 17048, IMSNU 14049, JCM 12382, KCTC 12226, NCTC 13459, Sejongia jeonii, Sejongia jeonii Yi et al. 2005, strain AT1047
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