STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC12411.1Outer membrane protein TolC. (431 aa)    
Predicted Functional Partners:
SFC12437.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.978
SFC12454.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.963
SFC12469.1
Hypothetical protein.
 
     0.887
SFC12493.1
Protein of unknown function.
 
     0.812
SFB79617.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.745
SFB73860.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.700
SFC09738.1
Outer membrane protein.
  
  
  0.642
SFC39395.1
HlyD family secretion protein.
  
  0.639
SFC16861.1
HlyD family secretion protein.
  
  0.612
SFB73009.1
Membrane fusion protein, multidrug efflux system.
  
  0.606
Your Current Organism:
Chryseobacterium jeonii
NCBI taxonomy Id: 266749
Other names: C. jeonii, Chryseobacterium jeonii (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1047, DSM 17048, IMSNU 14049, JCM 12382, KCTC 12226, NCTC 13459, Sejongia jeonii, Sejongia jeonii Yi et al. 2005, strain AT1047
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