STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC38579.1Threonine/homoserine efflux transporter RhtA. (289 aa)    
Predicted Functional Partners:
SFC38556.1
Hypothetical protein.
       0.773
SFC38516.1
Hypothetical protein.
       0.701
SFC38538.1
Uncharacterized membrane protein YgdD, TMEM256/DUF423 family.
       0.701
SFC38497.1
Hypothetical protein.
       0.669
SFC38447.1
3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family.
       0.612
SFC38473.1
Hypothetical protein.
       0.612
SFC02316.1
Hypothetical protein.
  
     0.510
SFC38434.1
Protein of unknown function (4846).
       0.440
SFC02335.1
Iron complex outermembrane recepter protein.
  
     0.416
SFC38601.1
Azurin.
       0.401
Your Current Organism:
Chryseobacterium jeonii
NCBI taxonomy Id: 266749
Other names: C. jeonii, Chryseobacterium jeonii (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1047, DSM 17048, IMSNU 14049, JCM 12382, KCTC 12226, NCTC 13459, Sejongia jeonii, Sejongia jeonii Yi et al. 2005, strain AT1047
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