STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC39326.1ABC-2 type transport system permease protein. (366 aa)    
Predicted Functional Partners:
SFC39350.1
ABC-2 type transport system ATP-binding protein.
 
 0.996
SFC39371.1
ABC-type multidrug transport system, ATPase component.
 
 0.996
SFB89793.1
Cu-processing system ATP-binding protein.
 
 
 0.938
SFC13120.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.938
SFC39395.1
HlyD family secretion protein.
 
   
 0.931
SFC39413.1
Outer membrane protein TolC.
 
     0.897
SFB94640.1
ABC-2 type transport system ATP-binding protein.
 
      0.885
SFC39437.1
Regulatory protein, tetR family.
 
     0.840
SFC39282.1
ABC-2 type transport system permease protein.
 
  
 
0.777
SFC39299.1
Hypothetical protein.
       0.773
Your Current Organism:
Chryseobacterium jeonii
NCBI taxonomy Id: 266749
Other names: C. jeonii, Chryseobacterium jeonii (Yi et al. 2005) Kampfer et al. 2009 emend. Hahnke et al. 2016, Chryseobacterium sp. AT1047, DSM 17048, IMSNU 14049, JCM 12382, KCTC 12226, NCTC 13459, Sejongia jeonii, Sejongia jeonii Yi et al. 2005, strain AT1047
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