STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HQ36_00520Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)    
Predicted Functional Partners:
HQ36_00515
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.732
HQ36_06040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.708
HQ36_02195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.561
HQ36_08200
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.536
HQ36_02175
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
HQ36_02200
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.493
HQ36_03735
Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.469
HQ36_02375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.459
HQ36_01520
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.436
HQ36_05820
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.428
Your Current Organism:
Porphyromonas gingivicanis
NCBI taxonomy Id: 266762
Other names: ATCC 55562, JCM 15907, NUM 301, P. gingivicanis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.