STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HQ36_08465ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa)    
Predicted Functional Partners:
HQ36_05570
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.901
pstB
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.900
HQ36_08460
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.854
HQ36_08450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.817
HQ36_08455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.816
HQ36_08470
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.720
HQ36_08145
Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.645
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.564
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
    
 
 0.560
HQ36_04840
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.555
Your Current Organism:
Porphyromonas gingivicanis
NCBI taxonomy Id: 266762
Other names: ATCC 55562, JCM 15907, NUM 301, P. gingivicanis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.