Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Meso_0006PFAM: carbon monoxide dehydrogenase subunit G; KEGG: mlo:mll5403 hypothetical protein. (156 aa)    
Predicted Functional Partners:
Meso_0060
PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: sme:SMc03103 putative carbon monoxide dehydrogenase medium subunit transmembrane protein.
 
  
 0.808
Meso_1291
PFAM: VWA containing CoxE-like; SMART: von Willebrand factor, type A; KEGG: mlo:mlr0089 hypothetical protein.
 
     0.803
Meso_0059
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mlo:mll1128 carbon-monoxide dehydrogenase large subunit.
 
  
 0.794
Meso_1290
PFAM: ATPase associated with various cellular activities, AAA_5; KEGG: mlo:mlr0088 hypothetical protein.
 
     0.794
Meso_0907
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mlo:mlr7702 putative dehydrogenase.
 
  
 0.784
Meso_1294
Molybdenum cofactor cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: mlo:mlr0093 hypothetical protein.
 
     0.672
Meso_0005
PFAM: ribulose-phosphate 3-epimerase; KEGG: mlo:mlr4760 pentose(ribulose)-5-phosphate-3-epimerase.
     
 0.671
Meso_0473
PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: ape:APE2219 292aa long hypothetical nicotine dehydrogenase chain A.
 
  
 0.656
Meso_1292
Predicted sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis; PFAM: protein of unknown function DUF182; KEGG: mlo:mlr0091 hypothetical protein.
 
     0.534
Meso_0474
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mbo:Mb0380c probable carbon monoxyde dehydrogenase (large chain).
  
 0.514
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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