Meso_0015 protein (Chelativorans sp. BNC1) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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Assay-based Predictions

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co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Chelativorans sp. BNC1

NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Meso_0015	Meso_0039	PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll5636 ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.	Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV2984 putative arginine/ornithine transport protein, ATP-binding protein; TC 3.A.1.3.-.	0.848
Meso_0015	Meso_0040	PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll5636 ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa2197 putative ABC transporter, permease; TC 3.A.1.3.-.	0.864
Meso_0015	Meso_1115	PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll5636 ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.	0.886
Meso_0015	Meso_1116	PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll5636 ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.	PFAM: ABC transporter related; SMART: ATPase; KEGG: bmb:BruAb1_0762 amino acid ABC transporter, ATP-binding protein.	0.841
Meso_0015	Meso_1563	PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll5636 ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	0.898
Meso_0015	Meso_1564	PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll5636 ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0952 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	0.885
Meso_0015	Meso_3147	PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll5636 ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.	Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV6281 putative ABC transporter ATP-binding protein - glutamine transport; TC 3.A.1.3.-.	0.843
Meso_0015	Meso_3148	PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll5636 ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV6282 putative glutamine ABC transporter permease protein; TC 3.A.1.3.-.	0.858
Meso_0015	Meso_3976	PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll5636 ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00161 probable amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	0.870
Meso_0015	Meso_3977	PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll5636 ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_980GM putative ABC transporter permease; TC 3.A.1.3.-.	0.869
Meso_0039	Meso_0015	Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV2984 putative arginine/ornithine transport protein, ATP-binding protein; TC 3.A.1.3.-.	PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll5636 ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.	0.848
Meso_0039	Meso_0040	Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV2984 putative arginine/ornithine transport protein, ATP-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa2197 putative ABC transporter, permease; TC 3.A.1.3.-.	0.998
Meso_0039	Meso_1115	Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV2984 putative arginine/ornithine transport protein, ATP-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.	0.932
Meso_0039	Meso_1563	Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV2984 putative arginine/ornithine transport protein, ATP-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	0.916
Meso_0039	Meso_1564	Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV2984 putative arginine/ornithine transport protein, ATP-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0952 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	0.919
Meso_0039	Meso_3148	Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV2984 putative arginine/ornithine transport protein, ATP-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV6282 putative glutamine ABC transporter permease protein; TC 3.A.1.3.-.	0.923
Meso_0039	Meso_3976	Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV2984 putative arginine/ornithine transport protein, ATP-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00161 probable amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	0.923
Meso_0039	Meso_3977	Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV2984 putative arginine/ornithine transport protein, ATP-binding protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_980GM putative ABC transporter permease; TC 3.A.1.3.-.	0.923
Meso_0040	Meso_0015	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa2197 putative ABC transporter, permease; TC 3.A.1.3.-.	PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll5636 ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.	0.864
Meso_0040	Meso_0039	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa2197 putative ABC transporter, permease; TC 3.A.1.3.-.	Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV2984 putative arginine/ornithine transport protein, ATP-binding protein; TC 3.A.1.3.-.	0.998