Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_0026PFAM: protein of unknown function DUF81; KEGG: mlo:mll5620 hypothetical protein. (305 aa)    
Predicted Functional Partners:
Meso_0027
TIGRFAM: conserved hypothetical protein; KEGG: mlo:mll5621 hypothetical protein.
 
     0.961
Meso_4036
UspA; PFAM: UspA; KEGG: mlo:mll5316 hypothetical protein.
 
     0.802
Meso_0025
PFAM: Peptidoglycan-binding domain 1 Sel1-like repeat; KEGG: mlo:mll5622 hypothetical protein.
       0.536
Meso_1983
KEGG: mlo:msr1476 hypothetical protein.
  
     0.480
Meso_0016
KEGG: bmb:BruAb2_0443 hypothetical protein.
  
     0.455
Meso_2149
PFAM: protein of unknown function DUF526; KEGG: mlo:mll2675 hypothetical protein.
  
     0.408
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.