Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_0053TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel; KEGG: pae:PA2470 gentisate 1,2-dioxygenase. (353 aa)    
Predicted Functional Partners:
Meso_3566
KEGG: cgb:cg3349 hypothetical protein.
 
  
 0.973
Meso_0052
3-hydroxybenzoate 6-hydroxylase; PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B1886 monooxygenase, FAD-binding.
 
   
 0.933
Meso_3565
Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel; KEGG: jan:Jann_2910 cupin 2 protein.
  
  
 
0.915
Meso_0054
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bte:BTH_II1389 fumarylacetoacetate hydrolase family protein.
 
   
 0.697
Meso_0055
TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase-like; KEGG: bbr:BB3255 putative glutathione-S-transferase.
 
   
 0.697
Meso_1117
PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: mlo:mll8158 salicylate hydroxylase.
 
   
 0.656
Meso_0056
Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.601
Meso_2927
PFAM: monooxygenase, FAD-binding; KEGG: bja:bll2502 hypothetical protein.
 
   
 0.601
Meso_0813
PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: reu:Reut_B3601 salicylate 1-monooxygenase.
 
   
 0.578
Meso_0051
Transcriptional regulator, IclR family; PFAM: Helix-turn-helix, type 11; SMART: regulatory proteins, IclR; KEGG: dar:Daro_0897 regulatory proteins, IclR.
       0.540
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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