Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0063PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: sme:SMc00790 probable dipeptide transport ATP-binding ABC transporter protein; Belongs to the ABC transporter superfamily. (282 aa)    
Predicted Functional Partners:
Meso_0065
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00788 probable dipeptide transport system permease protein.
  0.992
Meso_0066
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00787 probable dipeptide transport system permease protein.
 
  0.987
Meso_0064
PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: mlo:mlr5419 ABC transporter ATP-binding component; Belongs to the ABC transporter superfamily.
 
 
 
0.981
Meso_0067
PFAM: extracellular solute-binding protein, family 5; KEGG: sme:SMc00786 probable periplasmic dipeptide-binding protein.
 
  0.964
Meso_0076
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sil:SPO2552 peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: binding-protein-dependent transport systems inner membrane component ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase.
 
0.799
Meso_0561
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1882 putative integral membrane transport protein.
  0.718
Meso_1857
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll9134 Dipeptide transport system permease protein.
  0.698
Meso_0036
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1479 ABC oligopeptide transporter, inner membrane subunit OppC.
 
  0.696
Meso_3189
KEGG: mlo:mll3934 ABC transporter, ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase.
   
 
0.689
Meso_2406
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_4129 binding-protein-dependent transport systems inner membrane component.
  0.687
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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