Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_0068PFAM: protein of unknown function DUF924; KEGG: bms:BR1186 hypothetical protein. (183 aa)    
Predicted Functional Partners:
Meso_0067
PFAM: extracellular solute-binding protein, family 5; KEGG: sme:SMc00786 probable periplasmic dipeptide-binding protein.
       0.505
Meso_3408
PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mlr3769 transmembrane transport protein.
      0.484
Meso_2547
PFAM: glutathione S-transferase-like; KEGG: bmb:BruAb1_1487 glutathione S-transferase family protein.
 
     0.440
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.