Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0079PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rsp:RSP_3399 carbon-nitrogen hydrolase family protein. (272 aa)    
Predicted Functional Partners:
Meso_0313
PFAM: aldehyde dehydrogenase; KEGG: atc:AGR_L_75 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.910
Meso_0804
PFAM: aldehyde dehydrogenase; KEGG: pfo:Pfl_3233 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.910
Meso_0161
PFAM: glutamine synthetase, catalytic region; KEGG: bms:BRA0768 glutamine synthetase family protein.
    
 0.906
Meso_1544
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region glutamine synthetase, beta-Grasp; KEGG: sme:SMc00948 glutamine synthetase I protein.
    
 0.906
Meso_1870
PFAM: glutamine synthetase, catalytic region; KEGG: sme:SMc01594 probable glutamine synthetase.
    
 0.906
Meso_2296
PFAM: Amidase; KEGG: dar:Daro_1360 amidase; Belongs to the amidase family.
  
 
 0.905
Meso_2714
PFAM: Amidase; KEGG: mlo:mlr2975 glutamyl-tRNA(Gln) amidotransferase, subunitA.
  
 
 0.905
Meso_3422
PFAM: NAD-glutamate dehydrogenase; KEGG: mlo:mll4104 hypothetical protein.
     
 0.904
Meso_1452
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] region; KEGG: mlo:mlr2863 nitrite reductase small subunit.
   
 
  0.902
Meso_1451
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like nitrite and sulphite reductase 4Fe-4S region BFD-like [2Fe-2S]-binding region; KEGG: nwi:Nwi_0719 BFD-like (2Fe-2S)-binding region.
     
  0.900
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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