Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_0080Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: jan:Jann_2571 transcriptional regulator, LysR family. (303 aa)    
Predicted Functional Partners:
Meso_0646
PFAM: glycosyl transferase, family 2.
  
     0.739
Meso_0798
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: bbr:BB0351 LysR family regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.665
Meso_0498
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: rpa:RPA4114 transcriptional regulator, LysR family.
  
     0.646
Meso_1848
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: bja:bll6415 transcriptional regulatory protein.
  
     0.634
Meso_2386
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: atc:AGR_C_3765 hypothetical protein.
  
     0.624
Meso_2313
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: rpa:RPA4114 transcriptional regulator, LysR family.
  
     0.601
Meso_0650
KEGG: ret:RHE_CH03215 ketal pyruvate transferase protein.
  
     0.595
Meso_2663
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: rso:RS01682 probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.591
Meso_3862
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: rpa:RPA4114 transcriptional regulator, LysR family.
  
     0.584
Meso_1300
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: mlo:mll1248 probable transcriptional regulator.
  
     0.574
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.