Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Meso_0135PFAM: transport system permease protein; KEGG: jan:Jann_2124 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (356 aa)    
Predicted Functional Partners:
Meso_0136
PFAM: ABC transporter related; SMART: ATPase; KEGG: bsu:BG14034 putative iron(III) dicitrate transport system ATP-binding protein.
 
 0.987
hmuV
ABC transporter related protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.947
Meso_2066
PFAM: ABC transporter related; SMART: ATPase; KEGG: rru:Rru_A0491 ABC transporter component.
 
 0.944
Meso_0133
PFAM: periplasmic binding protein; KEGG: jan:Jann_2122 periplasmic binding protein.
 
 0.935
Meso_1442
PFAM: periplasmic binding protein; KEGG: sme:SMc01512 putative hemin binding periplasmic transmembrane protein.
 
 
 0.883
Meso_0134
PFAM: transport system permease protein; KEGG: jan:Jann_2123 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    
0.828
Meso_2064
PFAM: periplasmic binding protein; KEGG: bms:BR1346 iron compound ABC transporter, periplasmic iron compound-binding protein.
 
 0.720
Meso_1440
TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor TonB-dependent receptor, plug; KEGG: mlo:mlr1155 heme acquisition protein hasR.
 
  
 0.619
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.428
Meso_1937
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll6253 ABC transporter permease protein.
     
 0.419
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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