Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0136PFAM: ABC transporter related; SMART: ATPase; KEGG: bsu:BG14034 putative iron(III) dicitrate transport system ATP-binding protein. (272 aa)    
Predicted Functional Partners:
Meso_0134
PFAM: transport system permease protein; KEGG: jan:Jann_2123 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.987
Meso_0135
PFAM: transport system permease protein; KEGG: jan:Jann_2124 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.987
Meso_0133
PFAM: periplasmic binding protein; KEGG: jan:Jann_2122 periplasmic binding protein.
 
 0.972
Meso_1443
PFAM: transport system permease protein; KEGG: mlo:mll1150 permease protein of ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.946
Meso_2065
PFAM: transport system permease protein; KEGG: rsp:RSP_2404 ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.946
Meso_2064
PFAM: periplasmic binding protein; KEGG: bms:BR1346 iron compound ABC transporter, periplasmic iron compound-binding protein.
 
 0.838
Meso_3668
PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mll3197 ABC transporter ATP-binding protein (in RpoN upstream).
     
  0.679
znuC
ABC transporter related protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
    
 0.663
Meso_1757
PFAM: permease YjgP/YjgQ; KEGG: mlo:mll7866 hypothetical protein.
     
  0.660
Meso_1758
PFAM: permease YjgP/YjgQ; KEGG: mlo:mll7865 hypothetical protein.
     
  0.660
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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