Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_0142PFAM: oxidoreductase-like Oxidoreductase-like; KEGG: ret:RHE_CH03255 myo-inositol 2-dehydrogenase protein. (348 aa)    
Predicted Functional Partners:
Meso_0143
PFAM: protein of unknown function DUF1037; KEGG: sme:SMb20329 probable ThuA protein, function.
 
   
 0.940
Meso_0449
PFAM: AP endonuclease 2-like Xylose isomerase-like TIM barrel; KEGG: mlo:mll3362 hypothetical protein.
 
  
 0.517
Meso_1470
KEGG: bmb:BruAb1_1473 hypothetical protein.
  
     0.517
Meso_0141
PFAM: Na+/Pi-cotransporter; KEGG: mlo:mlr2470 hypothetical protein.
       0.459
Meso_1603
KEGG: sco:SCO0366 hypothetical protein.
 
  
 0.403
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.