Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Meso_0255PFAM: PrkA serine kinase PrkA AAA; KEGG: sme:SMc01267 serine protein kinase. (649 aa)    
Predicted Functional Partners:
Meso_0256
PFAM: protein of unknown function DUF444; KEGG: sme:SMc01266 hypothetical protein; Belongs to the UPF0229 family.
 
  
 0.991
Meso_0257
SpoVR; PFAM: SpoVR; KEGG: sme:SMc01265 hypothetical protein.
 
  
 0.991
Meso_1341
TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: bms:BR1049 trp repressor binding protein.
   
    0.636
Meso_1527
Trehalose 6-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
   
    0.633
Meso_3052
PFAM: aldo/keto reductase; KEGG: sme:SMc00101 putative oxidoreductase protein.
   
    0.625
Meso_3900
PFAM: aldo/keto reductase; KEGG: ade:Adeh_3218 aldo/keto reductase.
   
    0.625
Meso_4023
PFAM: aldo/keto reductase; KEGG: ade:Adeh_2028 2,5-didehydrogluconate reductase.
   
    0.625
Meso_1784
PFAM: protein of unknown function DUF1508; KEGG: ret:RHE_CH03509 hypothetical protein.
   
    0.616
Meso_1529
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.604
Meso_3240
PFAM: OsmC-like protein; KEGG: mlo:mlr4254 osmotically inducible protein C, putative ATP/GTP binding protein.
   
    0.588
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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