Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_0267KEGG: mlo:mlr2967 hypothetical protein. (161 aa)    
Predicted Functional Partners:
Meso_0268
KEGG: mlo:mlr2965 hypothetical protein.
 
   
 0.960
Meso_0269
KEGG: mlo:mlr2964 hypothetical protein.
 
   
 0.947
Meso_0277
Flagellar hook-associated protein 3 (HAP3) flgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   
 0.867
Meso_0276
PFAM: flagellar FlaF; KEGG: mlo:mlr2940 flagellar protein FlaF.
 
     0.858
flbT
Flagellar FlbT; Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation.
 
   
 0.855
Meso_0278
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078-like; KEGG: mlo:mlr2938 flagellar hook-associated protein 1 FlgK.
 
   
 0.847
Meso_0271
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
 
   
 0.841
Meso_0290
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
   
 0.819
Meso_0280
Two component transcriptional regulator, winged helix family; PFAM: transcriptional regulatory protein-like; KEGG: mlo:mlr2935 two-component response regulator.
 
     0.810
Meso_0281
PFAM: Lytic transglycosylase, catalytic; KEGG: sme:SMc03045 hypothetical protein.
 
     0.807
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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