Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0276PFAM: flagellar FlaF; KEGG: mlo:mlr2940 flagellar protein FlaF. (115 aa)    
Predicted Functional Partners:
flbT
Flagellar FlbT; Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation.
 
  
 0.995
Meso_0278
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078-like; KEGG: mlo:mlr2938 flagellar hook-associated protein 1 FlgK.
 
  
 0.983
Meso_0277
Flagellar hook-associated protein 3 (HAP3) flgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.978
Meso_0287
Flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.954
Meso_0288
Flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.945
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.927
Meso_0279
PFAM: flagellar basal body rod protein protein of unknown function DUF1078-like flagellar basal body FlaE; KEGG: mlo:mlr2937 flagellar hook protein FlgE.
 
  
 0.926
Meso_0274
PFAM: flagellar hook capping protein; KEGG: mlo:mlr2942 flagellar hook assembly scaffolding protein flgD.
 
  
 0.921
Meso_0269
KEGG: mlo:mlr2964 hypothetical protein.
 
    0.917
Meso_0284
PFAM: OmpA/MotB; KEGG: mlo:mlr2931 flagellar motor protein MotB.
 
  
 0.912
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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