Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0280Two component transcriptional regulator, winged helix family; PFAM: transcriptional regulatory protein-like; KEGG: mlo:mlr2935 two-component response regulator. (223 aa)    
Predicted Functional Partners:
Meso_0277
Flagellar hook-associated protein 3 (HAP3) flgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.892
Meso_1942
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ppu:PP3761 sensor histidine kinase/response regulator.
  
 
 0.884
Meso_0276
PFAM: flagellar FlaF; KEGG: mlo:mlr2940 flagellar protein FlaF.
 
  
 0.880
Meso_0278
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078-like; KEGG: mlo:mlr2938 flagellar hook-associated protein 1 FlgK.
 
  
 0.879
Meso_0283
KEGG: sme:SMc03043 chemotaxis precursor (motility protein C) transmembrane.
 
   
 0.875
Meso_0281
PFAM: Lytic transglycosylase, catalytic; KEGG: sme:SMc03045 hypothetical protein.
 
   
 0.870
flbT
Flagellar FlbT; Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation.
 
  
 0.869
Meso_0284
PFAM: OmpA/MotB; KEGG: mlo:mlr2931 flagellar motor protein MotB.
 
  
 0.862
Meso_0600
CheA signal transduction histidine kinase; PFAM: response regulator receiver CheW-like protein ATP-binding region, ATPase-like Hpt; KEGG: sme:SMa1558 putative histidine kinase, chemotaxis.
  
 
 0.843
Meso_0290
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.815
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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