STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Meso_0284PFAM: OmpA/MotB; KEGG: mlo:mlr2931 flagellar motor protein MotB. (452 aa)    
Predicted Functional Partners:
Meso_0303
KEGG: mlo:mll2905 flagellar motor protein MotA.
 
 0.998
Meso_0286
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.984
Meso_0278
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078-like; KEGG: mlo:mlr2938 flagellar hook-associated protein 1 FlgK.
 
  
 0.976
Meso_0283
KEGG: sme:SMc03043 chemotaxis precursor (motility protein C) transmembrane.
 
   
 0.959
Meso_0279
PFAM: flagellar basal body rod protein protein of unknown function DUF1078-like flagellar basal body FlaE; KEGG: mlo:mlr2937 flagellar hook protein FlgE.
 
  
 0.958
Meso_0287
Flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.958
Meso_0298
KEGG: mlo:mlr2911 flagellar basal-body rod protein flgB.
 
  
 0.954
Meso_0274
PFAM: flagellar hook capping protein; KEGG: mlo:mlr2942 flagellar hook assembly scaffolding protein flgD.
 
  
 0.945
Meso_0288
Flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.941
Meso_0295
TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein protein of unknown function DUF1078-like; KEGG: mlo:mlr2915 flagellar basal body distal rod protein, FlgG; Belongs to the flagella basal body rod proteins family.
 
 
 0.938
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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