Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_0286Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (545 aa)    
Predicted Functional Partners:
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.996
Meso_0279
PFAM: flagellar basal body rod protein protein of unknown function DUF1078-like flagellar basal body FlaE; KEGG: mlo:mlr2937 flagellar hook protein FlgE.
 
 
 0.996
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.996
Meso_0297
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078-like; KEGG: mlo:mlr2912 flagellar basal-body rod protein flgC; Belongs to the flagella basal body rod proteins family.
 
 
 0.996
Meso_0306
PFAM: flagellar motor switch protein FliG; KEGG: mlo:mll2901 flagellar motor switch protein FliG.
 
 
 0.996
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
 
 0.995
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.995
Meso_0295
TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein protein of unknown function DUF1078-like; KEGG: mlo:mlr2915 flagellar basal body distal rod protein, FlgG; Belongs to the flagella basal body rod proteins family.
 
 
 0.995
Meso_0298
KEGG: mlo:mlr2911 flagellar basal-body rod protein flgB.
 
 
 0.995
Meso_0274
PFAM: flagellar hook capping protein; KEGG: mlo:mlr2942 flagellar hook assembly scaffolding protein flgD.
 
 
 0.992
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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