Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0303KEGG: mlo:mll2905 flagellar motor protein MotA. (295 aa)    
Predicted Functional Partners:
Meso_0284
PFAM: OmpA/MotB; KEGG: mlo:mlr2931 flagellar motor protein MotB.
 
 0.999
Meso_0306
PFAM: flagellar motor switch protein FliG; KEGG: mlo:mll2901 flagellar motor switch protein FliG.
 
  
 0.989
Meso_3188
PFAM: OmpA/MotB; KEGG: mlo:mlr3926 similar to flagellar motor protein MotB.
  
 0.989
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.981
Meso_0304
PFAM: surface presentation of antigens (SPOA) protein; KEGG: mlo:mll2904 flagellar motor switch protein FliM.
 
 
 0.979
Meso_0297
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078-like; KEGG: mlo:mlr2912 flagellar basal-body rod protein flgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.978
Meso_0298
KEGG: mlo:mlr2911 flagellar basal-body rod protein flgB.
 
  
 0.978
Meso_0286
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.977
Meso_0278
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078-like; KEGG: mlo:mlr2938 flagellar hook-associated protein 1 FlgK.
 
  
 0.976
Meso_0294
Flagellar protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
 
  
 0.971
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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