Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_0330PFAM: protein of unknown function DUF892; KEGG: sme:SMb20091 hypothetical protein. (169 aa)    
Predicted Functional Partners:
Meso_3526
PFAM: protein of unknown function DUF892; KEGG: rpa:RPA3726 hypothetical protein.
 
  
 0.876
Meso_4071
PFAM: protein of unknown function DUF892; KEGG: mlo:mll4608 YcfI, putative structural proteins.
 
  
 0.871
Meso_1876
PFAM: manganese containing catalase; KEGG: ana:alr0998 putative catalase.
 
    0.733
Meso_0331
KEGG: sil:SPO0259 membrane protein, putative.
       0.608
Meso_0329
Hypothetical protein.
       0.572
Meso_3822
PFAM: Antirestriction protein; KEGG: sme:SMa0900 possible anti-restriction protein.
  
     0.443
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.